[![Build Status](https://travis-ci.org/wang-q/App-Dazz.svg?branch=master)](https://travis-ci.org/wang-q/App-Dazz) [![Coverage Status](http://codecov.io/github/wang-q/App-Dazz/coverage.svg?branch=master)](https://codecov.io/github/wang-q/App-Dazz?branch=master) [![MetaCPAN Release](https://badge.fury.io/pl/App-Dazz.svg)](https://metacpan.org/release/App-Dazz) # NAME App::Dazz - Daligner-based UniTig utils # SYNOPSIS dazz [-?h] [long options...] -? -h --help show help Available commands: commands: list the application's commands help: display a command's help screen contained: discard contained unitigs cover: trusted regions in the first file covered by the second dazzname: rename FASTA reads for dazz_db group: group anchors by long reads layout: layout anchors within a group merge: merge overlapped unitigs orient: orient overlapped sequences to the same strand overlap: detect overlaps by daligner overlap2: detect overlaps between two (large) files by daligner show2ovlp: LAshow outputs to overlaps Run `dazz help command-name` for usage information. # DESCRIPTION App::Dazz comprises some Daligner-based UniTig utils # INSTALLATION brew install brewsci/science/poa brew install wang-q/tap/faops brew install wang-q/tap/dazz_db@20201008 brew install wang-q/tap/daligner@20201008 brew install wang-q/tap/intspan cpanm --installdeps https://github.com/wang-q/App-Dazz/archive/0.1.0.tar.gz # cpanm --installdeps --verbose --mirror-only --mirror http://mirrors.ustc.edu.cn/CPAN/ https://github.com/wang-q/App-Dazz.git cpanm -nq https://github.com/wang-q/App-Dazz/archive/0.1.0.tar.gz # cpanm -nq https://github.com/wang-q/App-Dazz.git # AUTHOR Qiang Wang # LICENSE This software is copyright (c) 2017 by Qiang Wang. This library is free software; you can redistribute it and/or modify it under the same terms as Perl itself.